Group Testing using left-and-right-regular sparse-graph codes

نویسندگان

  • Avinash Vem
  • Nagaraj Thenkarai Janakiraman
  • Krishna R. Narayanan
چکیده

We consider the problem of non-adaptive group testing of N items out of which K or less items are known to be defective. We propose a testing scheme based on left-andright-regular sparse-graph codes and a simple iterative decoder. We show that for any arbitrarily small ǫ > 0 our scheme requires only m = cǫK log c1N K tests to recover (1− ǫ) fraction of the defective items with high probability (w.h.p) i.e., with probability approaching 1 asymptotically in N and K, where the value of constants cǫ and l are a function of the desired error floor ǫ and constant c1 = l cǫ (observed to be approximately equal to 1 for various values of ǫ). More importantly the iterative decoding algorithm has a sub-linear computational complexity of O(K log N K ) which is known to be optimal. Also for m = c2K logK log N K tests our scheme recovers the whole set of defective items w.h.p. These results are valid for both noiseless and noisy versions of the problem as long as the number of defective items scale sub-linearly with the total number of items, i.e., K = o(N). The simulation results validate the theoretical results by showing a substantial improvement in the number of tests required when compared to the testing scheme based on left-regular sparse-graphs.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Design of Irregular Graphs for Erasure Decoding∗

Low-density parity check codes (LDPC codes) were introduced by Gallager [2] and have received intensive study in the last few years, as advances in technology have made their implementation far more practical than when they were originally proposed. Basically, an LDPC code is a binary linear block code defined by a sparse m × n parity-check matrix H . Equivalently such a code can be thought of ...

متن کامل

Linear codes with complementary duals related to the complement of the Higman-Sims graph

‎In this paper we study codes $C_p(overline{{rm HiS}})$ where $p =3,7‎, ‎11$ defined by the 3‎- ‎7‎- ‎and 11-modular representations of the simple sporadic group ${rm HS}$ of Higman and Sims of degree 100‎. ‎With exception of $p=11$ the codes are those defined by the row span of the adjacency matrix of the complement of the Higman-Sims graph over $GF(3)$ and $GF(7).$ We show that these codes ha...

متن کامل

Multilevel Group Testing via Sparse-graph Codes

In this paper, we consider the problem of multilevel group testing, where the goal is to recover a set of K defective items in a set of n items by pooling groups of items and observing the result of each test. The main difference of multilevel group testing with the classical non-adaptive group testing problem is that the result of each test is an integer in the set [L] = {0, 1, · · · , L}: if ...

متن کامل

More Sparse-Graph Codes for Quantum Error-Correction

We use Cayley graphs to construct several dual-containing codes, all of which have sparse graphs. These codes’ properties are promising compared to other quantum error-correcting codes. This paper builds on the ideas of the earlier paper Sparse-Graph Codes for Quantum ErrorCorrection (quant-ph/0304161), which the reader is encouraged to refer to. To recap: Our aim is to make classical error-cor...

متن کامل

Comparing the Bidirectional Baum-Welch Algorithm and the Baum-Welch Algorithm on Regular Lattice

A profile hidden Markov model (PHMM) is widely used in assigning protein sequences to protein families. In this model, the hidden states only depend on the previous hidden state and observations are independent given hidden states. In other words, in the PHMM, only the information of the left side of a hidden state is considered. However, it makes sense that considering the information of the b...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • CoRR

دوره abs/1701.07477  شماره 

صفحات  -

تاریخ انتشار 2017